PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E03689.1.p
Common NameEUGRSUZ_E03689, LOC104445519
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB
Protein Properties Length: 347aa    MW: 39487.1 Da    PI: 5.4231
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E03689.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.61.7e-191461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++lvd+++++G g+W+t ++  g+ R++k+c++rw +yl
  Eucgr.E03689.1.p 14 KGPWTPEEDQKLVDYIHKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61
                      79********************************************97 PP

2Myb_DNA-binding52.61e-1667111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
  Eucgr.E03689.1.p  67 RGRFSFEEEETIIQLHGILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                       89********************.*********.************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.7E-26564IPR009057Homeodomain-like
PROSITE profilePS5129425.495965IPR017930Myb domain
SuperFamilySSF466897.7E-3211108IPR009057Homeodomain-like
SMARTSM007176.0E-141363IPR001005SANT/Myb domain
PfamPF002492.2E-171461IPR001005SANT/Myb domain
CDDcd001674.98E-131661No hitNo description
Gene3DG3DSA:1.10.10.606.3E-2665116IPR009057Homeodomain-like
SMARTSM007176.7E-1666114IPR001005SANT/Myb domain
PROSITE profilePS5129420.07666116IPR017930Myb domain
PfamPF002494.9E-1567111IPR001005SANT/Myb domain
CDDcd001671.09E-1169112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MGRAPCCEKS GLKKGPWTPE EDQKLVDYIH KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHGILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHAPRL DLLDLSSFVN PCLFNNSSWA QVNLSRLLGI DPPIDPEQLR LAMFPLSSQH  180
QNSNPAPQNF QESQLINQQI QELPGFTTMA SPLVQFPNEP QVCQPNLVDE FPSNPTDLSS  240
SSNSQMSDLA SSLKEDYVPF PRYEYNYCSS DQSLIDRSST NSAFNSHDSY QSFGSSSPTA  300
MNSNSTYITA STEDEREISY CSDVLKFELP DLLDVNEFMY CQEPRW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-30121165108B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E03689.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057723.10.0PREDICTED: transcription factor MYB3-like
TrEMBLA0A059C9D70.0A0A059C9D7_EUCGR; Uncharacterized protein
STRINGVIT_00s0203g00070.t011e-137(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM4282646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-110MYB-like 102